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Dr. Md. Aftabuddin's Profile
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Dr. Md. Aftabuddin's Profile
            M D.    A F T A B U D D I N

  Academic Qualification

  1. B. Sc. (Mathematics Hons.), 1993
  2. M. Sc. (Mathematics)
  3. MCA (Computer Applications)
  4. M. Phil. (Mathematics)
  5. M. Tech. (Software Engineering)
  6. Ph.D.(Bioinformatics)

  Global Certifications

  1. IBM Certified Database Associate -- DB2 9 Fundamentals
  2. CCNSP - Cyberoam Security Certification

  Positions

  1. Information Scientist, West Bengal University of Technology (2010-)
  2. Technical Officer, Indian Institute of Science Education and Research- Kolkata (2008-1010)
  3. Project Officer / Faculty, Department of Bioinformatics, West Bengal University of Technology (2006-2008)
  4. Senior Assistant, Distributed Information Center, University of Calcutta (2001-2006)
  5. Guest Lecturer, Computer Science Department, University of Calcutta (MCA Course)
  6. Computer-in-Charge and Computer Faculty, St. Francis Xavier School (1997-2001)

  Software Developed

  1. AminoNet - Protein network construction and visualization tool
  2. FindtRNA - tRNA prediction tool
  3. TraceGD - Genetic disease prediction tool
  4. C2Analyzer - Cotargeted Cofunctional Analyzer
  5. No3CoGP - Non-Conserved and Conserved Coexpressed Gene Pairs
  6. IIKmTA - Inter and Intra Kingdom miRNA Target Analyzer
  7. Prostrate Cancer Hallmarks Map
  8. MoGE(being developed)

  Publications in International Journals

  1. Weighted and unweighted network of amino acids within protein. Physica A: Statistical Mechanics and its Applications, Volume 369, Issue 2, 15 September 2006, Pages 895-904 Md. Aftabuddin and Sudip Kundu
  2. Hydrophobic, hydrophilic and charged amino acids' networks within Protein. Biophys. J..2007; 93: 225-231 Md Aftabuddin and Sudip Kundu
  3. AminoNet - a tool to construct and visualize amino acid's network, and to calculate topological parameters Aftabuddin, Md. & Kundu, S. (2010). J. Appl. Cryst. 43, 367-369.
  4. Differential banding pattern based identification of urinary tract infection causing bacteria. Nandy, P., M. Aftabuddin, A.R. Thakur and S. RayChaudhuri, 2013. Am. J. Biochem. Biotechnol., 9: 124-132.
  5. Md. Aftabuddin, Chittabrata Mal, Arindam Deb, Sudip Kundu, C2Analyzer: Co-target–Co-function Analyzer, Genomics, Proteomics & Bioinformatics, Volume 12, Issue 3, June 2014, Pages 133-136, ISSN 1672-0229
  6. No3CoGP: Non-Conserved and Conserved Coexpressed Gene Pairs, Chittabrata Mall, Md. Aftabuddin and Sudip Kundu BMC Research Notes 2014, 7:886 (8 December 2014) doi:10.1186/1756-0500-7-886
  7. miRNA mediated network analysis: crosstalk among biological processes of rice (Oryza sativa), Chittabrata Mal; Arindam Deb; Md. Aftabuddin and Sudip Kundu(communicated)
  8. Network parameters of amino acid residues within a protein depend on their physico-chemical properties (communicated)

  Publications in Conference Procedings

  1. miRNA Mediated Regulation of Rice (Oryza sativa) Genome Chittabrata Mal, Arindam Deb, Aftabuddin Md, Sudip kundu Conference: 12th IFAC Symposium on Computer Applications in Biotechnology

  Teaching

  1. Integrated MS students of IISER-Kolkata from July 2009 to May 2010
  2. M.Tech.(Bioinformatics) and Integrated Ph.D. Students of West Bengal University of Technology from 22nd June 2006 to Dec 2009.
  3. B.Tech. Chemical Engineering students of Calcutta University as Guest Lecturer in 2007.
  4. BCA course students of Bijoy Krishna Girls College as Guest Faculty in the year 2006.
  5. Post Graduate Diploma in Bioinformatics Students of Jadavpur University in the year 2005.
  6. MCA Students of University of Calcutta from 2002 to 2004.

Last Updated: 27-08-2010 21:31
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